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Distinct Life Histories Impact Dikaryotic Genome Evolution in the Rust Fungus...
Abstract Stripe rust of wheat, caused by the obligate biotrophic fungus Puccinia striiformis f.sp. tritici, is a major threat to wheat production worldwide with an estimated... -
A framework for gene mapping in wheat demonstrated using the Yr7 yellow rust ...
We used three approaches to map the yellow rust resistance gene Yr7 and identify associated SNPs in wheat. First, we used a traditional QTL mapping approach using a double... -
Wheat chromatin architecture is organized in genome territories and transcrip...
Polyploidy is ubiquitous in eukaryotic plant and fungal lineages, and it leads to the co-existence of several copies of similar or related genomes in one nucleus. In plants,... -
Colombia's cyberinfrastructure for biodiversity: Building data infrastructure...
Colombia is a “megadiverse” country with vast natural resources. A history of recent conflict means that information is only now being collected on the natural capital of... -
A Sequence Distance Graph framework for genome assembly and analysis
The Sequence Distance Graph (SDG) framework works with genome assembly graphs and raw data from paired, linked and long reads. It includes a simple deBruijn graph module, and... -
An Exploration of Deep-Learning Based Phenotypic Analysis to Detect Spike Reg...
Wheat is one of the major crops in the world, with a global demand expected to reach 850 million tons by 2050 that is clearly outpacing current supply. The continual pressure to... -
A modified sequence capture approach allowing standard and methylation analys...
Bread wheat has a large complex genome that makes whole genome resequencing costly. Therefore, genome complexity reduction techniques such as sequence capture make re-sequencing... -
CropSight: a scalable and open-source information management system for distr...
High-quality plant phenotyping and climate data lay the foundation for phenotypic analysis and genotype-environment interaction, providing important evidence not only for plant... -
Leaf-GP: an open and automated software application for measuring growth phen...
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