KASPTree software

网址 https://github.com/arorasanu/KASPTree

KASPTree is a pipeline to make a phylogenetic tree using KASP marker sequences extracted from RenSeq (Resistance gene enrichment sequencing) data. The RenSeq protocol requires a bait library and that these KASP marker sequences be part of the bait library.

Further details on this method can be found in the manuscript http://biorxiv.org/cgi/content/short/248146v1

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